Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

HapCUT2: A Method for Phasing Genomes Using Experimental Sequence Data.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2023

Bansal Vikas

Abstract excerpt

Rapid advances in high-throughput DNA sequencing technologies have enabled variant discovery from whole-genome sequencing (WGS) datasets; however linking variants on a chromosome together into haplotypes, also known as haplotype phasing, remains difficult. Human genomes are diploid and haplotype phasing is crucial for the complete interpretation and analysis of genetic variation.Hapcut2 (...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Algorithms
Share to Genome, Human
Share to Haplotypes

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to High-Throughput Nucleotide Sequencing

Share to Polymorphism, Single Nucleotide

Share to Sequence Analysis, DNA

Source

Identifiers

PMID: 36335497
DOI: 10.1007/978-1-0716-2819-5_9

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

HapCUT2: A Method for Phasing Genomes Using Experimental Sequence Data.PMID 36335497Read ↗

WhatsHap: fast and accurate read-based phasingSemantic proximity Read ↗

GCphase: an SNP phasing method using a graph partition and error correction algorithm.Semantic proximity Read ↗

MethPhaser: methylation-based haplotype phasing of human genomesSemantic proximity Read ↗

TinkerHap-a novel read-based phasing algorithm with integrated multimethod support for enhanced accuracy.Semantic proximity Read ↗

DCHap: A Divide-and-Conquer Haplotype Phasing Algorithm for Third-Generation Sequences.Semantic proximity Read ↗

How well can we create phased, diploid, human genomes?: An assessment of FALCON-Unzip phasing using a human trioSemantic proximity Read ↗

TinkerHap - A Novel Read-Based Phasing Algorithm with Integrated Multi-Method Support for Enhanced AccuracySemantic proximity Read ↗

Read-Based Phasing and Analysis of Phased Variants with WhatsHap.Semantic proximity Read ↗

Comparison of phasing strategies for whole human genomes.Semantic proximity Read ↗

Pairwise comparative analysis of six haplotype assembly methods based on users’ experienceSemantic proximity Read ↗

Accurate chromosome-scale haplotype-resolved assembly of human genomesSemantic proximity Read ↗

Complete genome phasing of family quartet by combination of genetic, physical and population-based phasing analysis.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.