Article

High-throughput, organ-scale 3D tubule tracking using TubuleMAP

2026-04-27

Abstract excerpt

Advances in tissue clearing and lightsheet microscopy enable mesoscale imaging of intact and convoluted tubular networks, yet analytical tools to map tubule continuity and assess injury patterns within and across tubules are limited. Here, we introduce TubuleMAP, a semi-automated pipeline for 3D tubule tracking and reconstruction that adapts to various morphological and staining patterns, leverages parallel proces...

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Identifiers and source

Literature Corpus work: f97afe52-6748-5f88-b743-412ce575692a
DOI: 10.64898/2026.04.23.720231

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