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Systematic analysis of key parameters for genomics-based real-time detection and tracking of multidrug-resistant bacteria

2020-09-25

Abstract excerpt

<h4>ABSTRACT</h4> <h4>Background</h4> Pairwise single nucleotide polymorphisms (SNPs) are a cornerstone for genomic approaches to multidrug-resistant organisms (MDROs) transmission inference in hospitals. However, the impact of key analysis parameters on these inferences has not been systematically analysed. <h4>Methods</h4> We conducted a multi-hospital 15-month prospective study, sequencing 1537 MDRO genomes...

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Literature Corpus work
e28babea-5b31-5300-bd8f-57464bc98212
DOI
10.1101/2020.09.24.310821
Open publication

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Systematic analysis of key parameters for genomics-based real-time detection and tracking of multidrug-resistant bacteriaDOI 10.1101/2020.09.24.310821
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