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Key parameters for genomics-based real-time detection and tracking of multidrug-resistant bacteria: a systematic analysis

6 Aug 2021

Abstract excerpt

BACKGROUND: Pairwise single nucleotide polymorphisms (SNPs) are a cornerstone of genomic approaches to the inference of transmission of multidrug-resistant (MDR) organisms in hospitals. However, the impact of many key analytical approaches on these inferences has not yet been systematically assessed. This study aims to make such a systematic assessment. METHODS: We conducted a 15-month prospective study (2-month...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 35544081
DOI: 10.1016/s2666-5247(21)00149-x

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