Article
BiG-MAP: an automated pipeline to profile metabolic gene cluster abundance and expression in microbiomes
2020-12-15
Abstract excerpt
Microbial gene clusters encoding the biosynthesis of primary and secondary metabolites play key roles in shaping microbial ecosystems and driving microbiome-associated phenotypes. Although effective approaches exist to evaluate the metabolic potential of such bacteria through identification of metabolic gene clusters in their genomes, no automated pipelines exist to profile the abundance and expression levels of s...
Topics
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- Biochemical and Structural Characterization
- Genomics and Phylogenetic Studies
- Infective Endocarditis Diagnosis and Management
- Machine Learning in Bioinformatics
- Microbial Metabolic Engineering and Bioproduction
- Microbial Natural Products and Biosynthesis
- Oral microbiology and periodontitis research
- Probiotics and Fermented Foods
Identifiers and source
- Literature Corpus work
- db16dc80-f828-5075-b6c4-77a47c3d1b9f
- DOI
- 10.1101/2020.12.14.422671
