Back to search

Article

Pipette: Encoding scientific literature into an executable Skill Graph for multi-agent bioinformatics

2026-04-12

Abstract excerpt

The cost of genomic sequencing has fallen by several orders of magnitude, yet data analysis remains a bottleneck concentrated among researchers with specialized computational expertise. While Large Language Models can generate bioinformatics code, they frequently produce incoherent multi-step workflows due to the absence of domain-specific analytical constraints. Here, we present Pipette, a multi-agent AI framewor...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
d81c81eb-a713-56fd-b177-5785bc645230
DOI
10.64898/2026.04.08.717332
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Pipette: Encoding scientific literature into an executable Skill Graph for multi-agent bioinformaticsDOI 10.64898/2026.04.08.717332
Biomni: A General-Purpose Biomedical AI AgentSemantic proximity
CRISPR-GPT for Agentic Automation of Gene Editing ExperimentsSemantic proximity
PromptBio: A Multi-Agent AI Platform for Bioinformatics Data AnalysisSemantic proximity
Case Study of Using AI as Co-Pilot in Biotech Research: Functional Network Analysis of Invasive CancerSemantic proximity
ChromSkills enables interpretable and reproducible agentic chromatin data analysisSemantic proximity
Medea: An AI agent for therapeutic reasoning across biological contextsSemantic proximity
EcoXAI: Autonomous Agentic Ecosystem for Explainable Artificial Intelligence and Biomedical DiscoverySemantic proximity
KG-Orchestra: An Open-Source Multi-Agent Framework for Evidence-Based Biomedical Knowledge Graphs EnrichmentSemantic proximity
Agentomics: An Agentic System that Autonomously Develops Novel State-of-the-art Solutions for Biomedical Machine Learning TasksSemantic proximity
OriGene: A Self-Evolving Virtual Disease Biologist Automating Therapeutic Target DiscoverySemantic proximity
Notebook-based alignment of human and agentic reasoning in single-cell biologySemantic proximity
CellAgent: LLM-Driven Multi-Agent Framework for Natural Language-Based Single-Cell AnalysisSemantic proximity
Select a neighboring publication to make it the new centre.