Back to search

Article

Benchmarking single cell transcriptome matching methods for incremental growth of cell atlases

2025-04-16

Abstract excerpt

<h4>Background</h4> The advancement of single cell technologies has driven significant progress in constructing a multiscale, pan-organ Human Reference Atlas for healthy human cells. Many multi-faceted cell atlases for different organs, species, and diseases now exist, though challenges remain in harmonizing cell types and unifying nomenclature among respective cell atlases. Multiple machine learning and artifici...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
d402cf0d-ec2e-575c-b74f-ac78da6758d0
DOI
10.1101/2025.04.10.648034
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Benchmarking single cell transcriptome matching methods for incremental growth of cell atlasesDOI 10.1101/2025.04.10.648034
Automatic cell type harmonization and integration across Human Cell Atlas datasetsSemantic proximity
An integrated cell atlas of the human lung in health and diseaseSemantic proximity
An integrated cell atlas of the human lung in health and diseaseSemantic proximity
Organism-scale annotation with Pan-human AzimuthSemantic proximity
Systematic evaluation of single-cell multimodal data integration for comprehensive human reference atlasSemantic proximity
Guided construction of single cell reference for human and mouse lungSemantic proximity
Systematic evaluation of single-cell multimodal data integration enhances cell type resolution and discovery of clinically relevant states in complex tissuesSemantic proximity
Single-cell reference mapping to construct and extend cell-type hierarchiesSemantic proximity
Cell type populations for 3D anatomical structures of the Human Reference AtlasSemantic proximity
An integrated cell atlas of the lung in health and diseaseSemantic proximity
hECA: the cell-centric assembly of a cell atlasSemantic proximity
Guided construction of single cell reference for human and mouse lungSemantic proximity
Select a neighboring publication to make it the new centre.