Article

Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and caliciviruses

2019-07-17

Abstract excerpt

<h4>ABSTRACT</h4> Next-generation sequencing is a powerful tool for virological surveillance. While Illumina® and Ion Torrent® sequencing platforms are used extensively for generating viral RNA genome sequences, there is limited data comparing different platforms. We evaluated the Illumina MiSeq, Ion Torrent PGM and Ion Torrent S5 platforms using a panel of sixteen specimens containing picornaviruses and human ca...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: ba65ed4f-e816-51a6-8247-77dda94c9680
DOI: 10.1101/705632

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Comparison of Illumina MiSeq and the Ion Torrent PGM and S5 platforms for whole-genome sequencing of picornaviruses and calicivirusesDOI 10.1101/705632Read

A comparison of five Illumina, Ion Torrent, and nanopore sequencing technology-based approaches for whole genome sequencing of SARS-CoV-2Semantic proximity Read

A Comparison of Five Illumina, Ion Torrent, and Nanopore Sequencing Technology-Based Approaches for Whole Genome Sequencing of SARS-CoV-2Semantic proximity Read

Multiplex Sequencing of SARS-Cov-2 genome directly from clinical samples using the Ion Personal Genome Machine (PGM)Semantic proximity Read

Illumina MiSeq and iSeq platforms yield comparable results for viral genomic sequencing.Semantic proximity Read

SARS-CoV-2 genomes recovered by long amplicon tiling multiplex approach using nanopore sequencing and applicable to other sequencing platformsSemantic proximity Read

Comparison and benchmark of gut viral genomes detected from short- and long-read metagenomesSemantic proximity Read

Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeqSemantic proximity Read

Evaluation of long-read sequencing for Ostreid herpesvirus type 1 genome characterization from <i>Magallana gigas</i> infected tissuesSemantic proximity Read

Complementary insights into gut viral genomes: a comparative benchmark of short- and long-Read metagenomes using diverse assemblers and binnersSemantic proximity Read

Next generation sequencing of viral RNA genomes.Semantic proximity Read

COVseq is a cost-effective workflow for mass-scale SARS-CoV-2 genomic surveillanceSemantic proximity Read

Enhancing public health surveillance: a comparative study of platform-specific and hybrid assembly approaches in SARS-CoV-2 genome sequencing.Semantic proximity Read