Article
SpotClean adjusts for spot swapping in spatial transcriptomics data
2021-06-12
Abstract excerpt
<h4>Summary</h4> Spatial transcriptomics (ST) is a powerful and widely-used approach for profiling genome-wide gene expression across a tissue with emerging applications in molecular medicine and tumor diagnostics. Recent spatial transcriptomics experiments utilize slides containing thousands of spots with spot-specific barcodes that bind mRNA. Ideally, unique molecular identifiers at a spot measure spot-specific...
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Identifiers and source
- Literature Corpus work
- ac4e4cc7-797c-55e2-8f84-0a01a36292e3
- DOI
- 10.1101/2021.06.11.448105