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Application of nanopore sequencing to identify antimicrobial resistance genes, mobile genetic elements and virulence factors in clinical isolates

2023-10-26

Abstract excerpt

The global health challenge posed by the emergence of antibiotic resistance pathogen is further exacerbated in African countries by the indiscriminate use of antibiotics, poor surveillance and lack of stewardship programs. To address this issue, we employed the Oxford Nanopore Technologies (ONT) to sequence 17 clinical isolates from a referral hospital in Kenya. Our comprehensive bioinformatics approach facilitate...

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Identifiers and source

Literature Corpus work
a8a68d01-67b0-53aa-97d6-7c9259743c7e
DOI
10.1101/2023.10.25.563907
Open publication

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Application of nanopore sequencing to identify antimicrobial resistance genes, mobile genetic elements and virulence factors in clinical isolatesDOI 10.1101/2023.10.25.563907
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