Article

Variant calling for cpn60 barcode sequence-based microbiome profiling

2019-08-29

Abstract excerpt

Amplification and sequencing of conserved genetic barcodes such as the cpn60 gene is a common approach to determining the taxonomic composition of microbiomes. Exact sequence variant calling has been proposed as an alternative to previously established methods for aggregation of sequence reads into operational taxonomic units (OTU). We investigated the utility of variant calling for cpn60 barcode sequences and det...

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Literature Corpus work: a75c2de8-6641-5ac8-9f34-11218ae27499
DOI: 10.1101/749267

Open publication

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