Article

<i>Tempus et Locus</i> : a tool for extracting precisely dated viral sequences from GenBank, and its application to the phylogenetics of primate erythroparvovirus 1 (B19V)

2016-07-01

Abstract excerpt

The presence of data in the “collection_date” field of a GenBank sequence record is of great assistance in the use of that sequence for Bayesian phylogenetics using “tip-dating”. We present Tempus et Locus (TeL), a tool for extracting such sequences from a GenBank-formatted sequence database. TeL shows that 60% of viral sequences in GenBank have collection date fields, but that this varies considerably between sp...

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Literature Corpus work: 87ecb638-85f6-5cee-88f3-e62ac9b496c6
DOI: 10.1101/061697

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