Article

A Portable and Scalable Genomic Analysis Pipeline for <i>Streptococcus pneumoniae</i> Surveillance: GPS Pipeline

2024-11-29

Abstract excerpt

Ever increasing global sequencing capacity provides an unprecedented opportunity in utilising genomic information captured from whole-genome sequencing to enhance pathogen surveillance. However, there is a growing need for developing user-friendly tools to effectively analyse the increasing volume of data. To meet this need, we have developed a genomic analysis pipeline, GPS Pipeline, which is portable and scalabl...

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Literature Corpus work: 6976eb2e-3e08-5945-8962-149d527e2800
DOI: 10.1101/2024.11.27.625679

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