Article

Benchmarking of tools for resolving plasmids from short-read assemblies for <i>Klebsiella pneumoniae</i>

2025-07-27

Abstract excerpt

The critical role of plasmids, particularly in the dissemination of AMR and virulence in nosocomial pathogens like Klebsiella pneumoniae , underpins the need for robust and scalable tools for plasmid identification and reconstruction from large-scale datasets of short-read sequence data that are routinely generated in clinical and public health settings. Here, we sought to evaluate all available tools to determin...

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Literature Corpus work: 666a2f4e-de10-5469-98ac-e9134543459e
DOI: 10.1101/2025.07.24.666686

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