Article

Core Genome Multi Locus Sequence Typing and Single Nucleotide Polymorphism Analysis in the Epidemiology of <i>Brucella melitensis</i> Infections

2018-04-07

Abstract excerpt

The use of whole genome sequencing (WGS) using next generation sequencing (NGS) technology has become a widely accepted method for microbiology laboratories in the application of molecular typing for outbreak tracing and genomic epidemiology. Several studies demonstrated the usefulness of WGS data analysis through Single Nucleotide Polymorphism (SNP) calling from a reference sequence analysis for Brucella meliten...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 368b8c8f-8d33-5953-8fca-3c1a2be25b67
DOI: 10.1101/297010

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Core Genome Multi Locus Sequence Typing and Single Nucleotide Polymorphism Analysis in the Epidemiology of <i>Brucella melitensis</i> InfectionsDOI 10.1101/297010Read

Core Genome Multilocus Sequence Typing and Single Nucleotide Polymorphism Analysis in the Epidemiology of Brucella melitensis Infections.Semantic proximity Read

Core Genome Multilocus Sequence Typing Scheme for Improved Characterization and Epidemiological Surveillance of Pathogenic BrucellaSemantic proximity Read

Whole genome sequencing of Brucella melitensis isolated from 57 patients in Germany reveals high diversity in strains from Middle East.Semantic proximity Read

Full genome SNP-based phylogenetic analysis reveals the origin and global spread of Brucella melitensis.Semantic proximity Read

Genomic analysis of Brucella melitensis reveals new insights into phylogeny and evolutionary divergence.Semantic proximity Read

Tracking the Distribution of Brucella abortus in Egypt Based on Core Genome SNP Analysis and In Silico MLVA-16Semantic proximity Read

Global evolution and phylogeography of Brucella melitensis strains.Semantic proximity Read

Molecular characteristics of Brucella melitensis isolates from humans in Qinghai Province, ChinaSemantic proximity Read

Tracking the distribution, genetic diversity and lineage of Brucella melitensis recovered from humans and animals in Egypt based on core-genome SNP analysis and in silico MLVA-16.Semantic proximity Read

A Whole-Genome-Based Gene-by-Gene Typing System for Standardized High-Resolution Strain Typing of Bacillus anthracis.Semantic proximity Read

Core Genome Multi-locus Sequence Typing Analyses of Leptospira spp. Using the Bacterial Isolate Genome Sequence Database.Semantic proximity Read

Molecular characteristics of Brucella melitensis isolates from humans in Qinghai Province, China.Semantic proximity Read