Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Core Genome Multi-locus Sequence Typing Analyses of Leptospira spp. Using the Bacterial Isolate Genome Sequence Database.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2020

Grillová Linda, Picardeau Mathieu

Abstract excerpt

With the advent of whole-genome sequencing (WGS), comparative analysis has led to the use of core genome MLST (cgMLST) schemes for the high-resolution reproducible typing of bacterial isolates. In cgMLST, hundreds of loci are used for gene-by-gene comparisons of assembled genomes for studying the genetic diversity of clinically important pathogens. Combination of the cgMLST data and metadata of the isolates is...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Databases, Nucleic Acid
Share to Genome, Bacterial

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genotype

Share to Leptospira

Share to Leptospirosis

Share to Molecular Epidemiology

Share to Multilocus Sequence Typing

Share to Whole Genome Sequencing

Source

Identifiers

PMID: 32632855
DOI: 10.1007/978-1-0716-0459-5_2

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 1 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Core Genome Multi-locus Sequence Typing Analyses of Leptospira spp. Using the Bacterial Isolate Genome Sequence Database.PMID 32632855Read ↗

Core Genome Multilocus Sequence Typing Scheme for Improved Characterization and Epidemiological Surveillance of Pathogenic BrucellaSemantic proximity Read ↗

Multilocus sequence typing method for identification and genotypic classification of pathogenic Leptospira species.Semantic proximity Read ↗

Advancing <i>Legionella pneumophila</i> genomic surveillance with a high-resolution cg/wgMLST schema for outbreak detection and investigationSemantic proximity Read ↗

Population structure and minimum core genome typing of Legionella pneumophila.Semantic proximity Read ↗

Core Genome Multilocus Sequence Typing and Single Nucleotide Polymorphism Analysis in the Epidemiology of Brucella melitensis Infections.Semantic proximity Read ↗

Core Genome Multi Locus Sequence Typing and Single Nucleotide Polymorphism Analysis in the Epidemiology of <i>Brucella melitensis</i> InfectionsSemantic proximity Read ↗

Next-Generation Sequencing Analysis of Pathogenic Leptospira: A Way Forward for Understanding Infectious Disease Dynamics in Low/Middle-Income, Disease-Endemic Settings.Semantic proximity Read ↗

Genetic diversity of Leptospira isolates in Lao PDR and genome analysis of an outbreak strain.Semantic proximity Read ↗

Whole genome sequencing and de novo assembly of three virulent Indian isolates of Leptospira.Semantic proximity Read ↗

Genetic structure and diversity of the rfb locus of pathogenic species of the genus LeptospiraSemantic proximity Read ↗

Development of the Pneumococcal Genome Library, a core genome multilocus sequence typing scheme, and a taxonomic life identification number barcoding system to investigate and define pneumococcal population structureSemantic proximity Read ↗

Bacterial genome sequencing in clinical microbiology: a pathogen-oriented reviewSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.