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Article

A Whole-Genome-Based Gene-by-Gene Typing System for Standardized High-Resolution Strain Typing of Bacillus anthracis.

Journal of clinical microbiology - 18 Jun 2021

Abdel-Glil Mostafa Y, Chiaverini Alexandra, Garofolo Giuliano, Fasanella Antonio, Parisi Antonio, Harmsen Dag, Jolley Keith A, Elschner Mandy C, Tomaso Herbert, Linde Jörg, Galante Domenico

Abstract excerpt

Whole-genome sequencing (WGS) has been established for bacterial subtyping and is regularly used to study pathogen transmission, to investigate outbreaks, and to perform routine surveillance. Core-genome multilocus sequence typing (cgMLST) is a bacterial subtyping method that uses WGS data to provide a high-resolution strain characterization. This study aimed at developing a novel cgMLST scheme for Bacillus...

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Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

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Identifiers

PMID: 33827898
DOI: 10.1128/JCM.02889-20
PMCID: PMC8218748

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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