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Context-Seq: CRISPR-Cas9 Targeted Nanopore Sequencing for Transmission Dynamics of Antimicrobial Resistance

2024-09-12

Abstract excerpt

Precisely understanding how and to what extent antimicrobial resistance (AMR) is exchanged between animals and humans is needed to inform control strategies. Metagenomic sequencing has low detection for rare targets such as antibiotic resistance genes, while whole genome sequencing of isolates misses exchange between uncultured bacterial species. We introduce Context-Seq, CRISPR-Cas9 targeted sequencing of ARGs an...

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Literature Corpus work
2cafc925-ca35-5bf7-94c9-1d4c97b1fe7d
DOI
10.1101/2024.09.12.612745
Open publication

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Context-Seq: CRISPR-Cas9 Targeted Nanopore Sequencing for Transmission Dynamics of Antimicrobial ResistanceDOI 10.1101/2024.09.12.612745
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