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A Bayesian inference method to estimate transmission trees with multiple introductions; applied to SARS-CoV-2 in Dutch mink farms

2023-02-07

Abstract excerpt

Knowledge of who infected whom during an outbreak of an infectious disease is important to determine risk factors for transmission and to design effective control measures. Both whole-genome sequencing of pathogens and epidemiological data provide useful information about the transmission events and underlying processes. Existing models to infer transmission trees usually assume that the pathogen is introduced onl...

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Literature Corpus work
251c8cf3-dd44-50e1-8958-84a81a0f0fa7
DOI
10.1101/2023.02.07.527429
Open publication

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A Bayesian inference method to estimate transmission trees with multiple introductions; applied to SARS-CoV-2 in Dutch mink farmsDOI 10.1101/2023.02.07.527429
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