Article

AMON: Annotation of metabolite origins via networks to better integrate microbiome and metabolome data

2018-10-11

Abstract excerpt

<h4>ABSTRACT</h4> <h4>Motivation</h4> Untargeted metabolomics of host-associated samples has yielded insights into mechanisms by which microbes modulate health. However, data interpretation is challenged by the complexity of origins of the small molecules measured, which can come from the host, microbes that live with the host, or from other exposures such as diet or the environment. <h4>Results</h4> We address...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 06fb674f-22d0-549d-a1e4-13cb2572f835
DOI: 10.1101/439240

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

AMON: Annotation of metabolite origins via networks to better integrate microbiome and metabolome dataDOI 10.1101/439240Read

The human microbial exposome: expanding the Exposome-Explorer database with gut microbial metabolitesSemantic proximity Read

MetOrigin: Discriminating the origins of microbial metabolites for integrative analysis of the gut microbiome and metabolomeSemantic proximity Read

Complete genome-derived metabolic interactions reveal impact of gut ecology on human healthSemantic proximity Read

MAAMOUL: Metabolic network-based discovery of microbiome-metabolome shifts in diseaseSemantic proximity Read

Metabolome–Microbiome Crosstalk and Human DiseaseSemantic proximity Read

netome: a computational framework for metabolite profiling and omics network analysisSemantic proximity Read

Microbiome-metabolome interactions predict host phenotypeSemantic proximity Read

A metabolomics pipeline for the mechanistic interrogation of the gut microbiome.Semantic proximity Read

gutMGene v2.0: an updated comprehensive database for target genes of gut microbes and microbial metabolitesSemantic proximity Read

MiMeNet: Exploring Microbiome-Metabolome Relationships using Neural NetworksSemantic proximity Read

A Metabolome- and Metagenome-Wide Association Network Reveals Microbial Natural Products and Microbial Biotransformation Products from the Human MicrobiotaSemantic proximity Read

Exploration of the microbiota and metabolites within body fluids could pinpoint novel disease mechanisms.Semantic proximity Read