Article

An approximate likelihood method reveals ancient gene flow between human, chimpanzee and gorilla

2023-07-06

Abstract excerpt

<h4>ABSTRACT</h4> Gene flow and incomplete lineage sorting are two distinct sources of phylogenetic conflict, i . e ., gene trees that differ in topology from each other and from the species tree. Distinguishing between the two processes is a key objective of current evolutionary genomics. This is most often pursued via the so-called ABBA-BABA type of method, which relies on a prediction of symmetry of gene tre...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 01a7450b-504c-5491-bcd7-2f6bb7919bbe
DOI: 10.1101/2023.07.06.547897

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

An approximate likelihood method reveals ancient gene flow between human, chimpanzee and gorillaDOI 10.1101/2023.07.06.547897Read

A likelihood ratio test of speciation with gene flow using genomic sequence data.Semantic proximity Read

Inferring the mode of speciation from genomic data: a study of the great apes.Semantic proximity Read

Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection.Semantic proximity Read

Genomic Relationships and Speciation Times of Human, Chimpanzee, and Gorilla Inferred from a Coalescent Hidden Markov ModelSemantic proximity Read

A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species.Semantic proximity Read

Subdivision in an ancestral species creates asymmetry in gene trees.Semantic proximity Read

TRAILS: tree reconstruction of ancestry using incomplete lineage sortingSemantic proximity Read

Variational Inference Using Approximate Likelihood Under the Coalescent With RecombinationSemantic proximity Read

Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies.Semantic proximity Read

Whole genomes of Amazonian uakari monkeys reveal complex connectivity and fast differentiation driven by high environmental dynamism.Semantic proximity Read

Sequencing the orthologs of human autosomal forensic short tandem repeats provides individual- and species-level identification in African great apesSemantic proximity Read

PHRAPL: Phylogeographic Inference Using Approximate Likelihoods.Semantic proximity Read