Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Applicability of Nanopore-only whole-genome sequencing for Pseudomonas aeruginosa outbreak investigation in the ICU setting: a multicentric study.

Journal of clinical microbiology - 12 Aug 2026

Dingemans J, Vandersanden S, Hilkens P, Godelaine J, Magerman K, Crombé F, De Geyter D, Boel A, Bruynseels P, Frans J, Vandecandelaere P, Van den Abeele A M, Cartuyvels R

Abstract excerpt

Pseudomonas aeruginosa outbreaks frequently occur in intensive care units (ICUs). In particular, ICU patients requiring mechanical ventilation are vulnerable to P. aeruginosa ventilator-associated pneumonia, which is associated with high morbidity and mortality. Fast and accurate genotyping during the early stage is crucial to document and manage P. aeruginosa outbreaks at the ICU. In this study, we have...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Belgium
Share to Disease Outbreaks

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Intensive Care Units

Share to Nanopore Sequencing

Share to Nanopores

Share to Pseudomonas aeruginosa

Share to Pseudomonas Infections

Share to Whole Genome Sequencing

Source

Open in PubMed Open full text

Identifiers

PMID: 42506940
DOI: 10.1128/jcm.00572-26
PMCID: PMC13464046

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 8 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Applicability of Nanopore-only whole-genome sequencing for Pseudomonas aeruginosa outbreak investigation in the ICU setting: a multicentric study.PMID 42506940Read ↗

Rapid nanopore-based DNA sequencing protocol of antibiotic-resistant bacteria for use in surveillance and outbreak investigationSemantic proximity Read ↗

Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis.Semantic proximity Read ↗

An evolution of Nanopore next-generation sequencing technology: implications for medical microbiology and public health.Semantic proximity Read ↗

Real-time Nanopore de novo assembly of ESKAPE pathogens: Implications for antibiotic stewardshipSemantic proximity Read ↗

Evaluation of Oxford Nanopore Technologies workflows for genomic epidemiology of outbreak-associated bacterial isolates in the clinical setting.Semantic proximity Read ↗

Evaluation of Oxford Nanopore Technologies workflows for genomic epidemiology of outbreak‐associated bacterial isolates in the clinical settingSemantic proximity Read ↗

High-Resolution Analysis by Whole-Genome Sequencing of an International Lineage (Sequence Type 111) of Pseudomonas aeruginosa Associated with Metallo-Carbapenemases in the United Kingdom.Semantic proximity Read ↗

In-Depth Study of a Nosocomial Outbreak Caused by Extensively Drug-Resistant Pseudomonas aeruginosa Using Whole Genome Sequencing Coupled With a Polymerase Chain Reaction Targeting Strain-Specific Single Nucleotide Polymorphisms.Semantic proximity Read ↗

Nanopore sequencing enables highly accurate genotyping and identification of resistance determinants in key nosocomial pathogens.Semantic proximity Read ↗

Nanopore sequencing enables highly accurate genotyping and identification of resistance determinants in key nosocomial pathogensSemantic proximity Read ↗

Influence of Sequencing Technology on Pangenome-level Analysis and Detection of Antimicrobial Resistance Genes in ESKAPE PathogensSemantic proximity Read ↗

Detecting, mapping, and suppressing the spread of a decade-long <i>Pseudomonas aeruginosa</i> nosocomial outbreak with genomicsSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.