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Article

eQTL Meta-Analysis Reveals Conserved and Population-Specific Regulatory Variation Underlying Nutritional Trait Evolution and Domestication in Tomato.

Advanced science (Weinheim, Baden-Wurttemberg, Germany) - 1 Aug 2026

Zhao Jiantao, Wang Xin, Zhang Jing, McQuinn Ryan, Lee Je Min, Gonda Itay, Feder Ari, Xu Yimin, Wang Baike, Yu Qinghui, Tieman Denise M, Huang Sanwen, Klee Harry, Giovannoni James J, Fei Zhangjun

Abstract excerpt

Deciphering how genetic variation shapes transcriptional regulation is key to understanding the regulatory architecture of complex crop traits. Here, we present a comprehensive meta-analysis of expression quantitative trait loci (eQTLs) across five diverse tomato populations. We construct a genome-wide atlas of 40 928 eQTLs, comprising 9463 cis- and 31 465 trans-eQTLs, and reveal thousands of loci detectable only...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 42132963
DOI: 10.1002/advs.202519899
PMCID: PMC13335988

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026.

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