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Genomic characterization of avian pathogenic Escherichia coli and its potential as a marker organism for antimicrobial resistance.

Applied and environmental microbiology - 20 May 2026

Gaonkar Pankaj Prakash, Golden Reed, Santana-Pereira Alinne L R, Lambert Alyssa, Higgins Courtney, Adhikari Yagya, Bailey Matthew, Macklin Kenneth, Huber Laura

Abstract excerpt

Avian pathogenic Escherichia coli (APEC) poses a threat to poultry and public health due to its ability to cause avian disease, potentially contribute to foodborne illness, and carry antimicrobial resistance genes (ARGs). Given its ubiquitous nature and capacity to persist in diverse environments, APEC has potential as a marker organism for tracking antimicrobial resistance (AMR) in poultry production systems and...

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Identifiers

PMID: 42080571
DOI: 10.1128/aem.02244-25
PMCID: PMC13188900

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