A Super-Pangenome for Cultivated Citrus Reveals Evolutive Features During the Allopatric Phase of Their Reticulate Evolution.

doi:10.1111/pbi.70553

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A Super-Pangenome for Cultivated Citrus Reveals Evolutive Features During the Allopatric Phase of Their Reticulate Evolution.

Plant biotechnology journal - 1 May 2026

Droc Gaetan, Giraud Delphine, Belser Caroline, Labadie Karine, Duprat Simone, Cruaud Corinne, Istace Benjamin, Menezes Fredson Dos Santos, Mario de Andrade Silva Edson, Curk Franck, Costantino Gilles, Soriano Alexandre, Mournet Pierre, Dereeper Alexis, Miranda Maëva, Marchi Elodie, Santoni Sylvain, Santana Silva Raner José, Sidibe-Bocs Stéphanie, Luro François, Choisne Nathalie, Maumus Florian, Hufnagel Barbara, Micheli Fabienne, Wincker Patrick, Aury Jean-Marc, Lemainque Arnaud, Ollitrault Patrick

Abstract excerpt

The main genetic diversity observed in cultivated citrus results from a reticulate evolution involving four ancestral taxa whose radiation occurred in allopatry. In such context, GWAS analysis, genome diversity and transcriptomic studies will be significantly enhanced through pangenome approaches. We report the implementation of a super-pangenome for cultivated citrus, established with de novo assemblies of...

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PMID: 41631370
DOI: 10.1111/pbi.70553
PMCID: PMC13110163

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