Comparative use of InDel and SSR markers in deciphering the interspecific structure of cultivated citrus genetic diversity: a perspective for genetic association studies.

doi:10.1007/s00438-011-0658-4

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Article

Comparative use of InDel and SSR markers in deciphering the interspecific structure of cultivated citrus genetic diversity: a perspective for genetic association studies.

Molecular genetics and genomics : MGG - 1 Jan 2012

García-Lor Andrés, Luro François, Navarro Luis, Ollitrault Patrick

Abstract excerpt

Genetic stratification associated with domestication history is a key parameter for estimating the pertinence of genetic association study within a gene pool. Previous molecular and phenotypic studies have shown that most of the diversity of cultivated citrus results from recombination between three main species: C. medica (citron), C. reticulata (mandarin) and C. maxima (pummelo). However, the precise...

Topics

Base Sequence
Citrus
Cluster Analysis
DNA Primers
Genetic Association Studies
Genetic Variation
Genetics, Population
Genotype
INDEL Mutation
Linkage Disequilibrium

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Microsatellite Repeats

Models, Genetic

Molecular Sequence Data

Phylogeny

Principal Component Analysis

Sequence Analysis, DNA

Species Specificity

Source

Open in PubMed

Identifiers

PMID: 22160318
DOI: 10.1007/s00438-011-0658-4

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