Article
Repun: an accurate small variant representation unification method for multiple sequencing platforms.
Briefings in bioinformatics - 22 Nov 2024
Zheng Zhenxian, Ren Yingxuan, Chen Lei, Wong Angel On Ki, Li Shumin, Yu Xian, Lam Tak-Wah, Luo Ruibang
Abstract excerpt
Ensuring a unified variant representation aligning the sequencing data is critical for downstream analysis as variant representation may differ across platforms and sequencing conditions. Current approaches typically treat variant unification as a post-step following variant calling and are incapable of measuring the correct variant representation from the outset. Aligning variant representations with the...
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