SNooPy: a statistical framework for long-read metagenomic variant calling.

Abstract excerpt

Current long-read single-nucleotide variant callers were designed primarily for genomic data-particularly human genomes. While some have been used on metagenomic data, their underlying assumptions and training procedures fail to account for the inherent complexity of metagenomic samples. To date, no long-read variant caller has been purpose-built for metagenomic applications. To address this gap, we present...

Topics

Share this publication in a Topic to start or enrich a Post.

• Share to Algorithms
• Share to Deep Learning
• Share to Genome, Human