Article
High-quality genome of a modern soybean cultivar and resequencing of 547 accessions provide insights into the role of structural variation.
Nature genetics - 1 Oct 2024
Zhang Caiying, Shao Zhenqi, Kong Youbin, Du Hui, Li Wenlong, Yang Zhanwu, Li Xiangkong, Ke Huifeng, Sun Zhengwen, Shao Jiabiao, Chen Shiliang, Zhang Hua, Chu Jiahao, Xing Xinzhu, Tian Rui, Qin Ning, Li Junru, Huang Meihong, Sun Yaqian, Huo Xiaobo, Meng Chengsheng, Wang Guoning, Liu Yuan, Ma Zhiying, Tian Shilin, Li Xihuan
Abstract excerpt
Soybean provides protein, oil and multiple health-related compounds. Understanding the effects of structural variations (SVs) on economic traits in modern breeding is important for soybean improvement. Here we assembled the high-quality genome of modern cultivar Nongdadou2 (NDD2) and identified 25,814 SV-gene pairs compared to 29 reported genomes, with 13 NDD2-private SVs validated in 547 deep-resequencing...
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