De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits.

doi:10.1038/nbt.2979

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Article

De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits.

Nature biotechnology - 1 Oct 2014

Li Ying-hui, Zhou Guangyu, Ma Jianxin, Jiang Wenkai, Jin Long-guo, Zhang Zhouhao, Guo Yong, Zhang Jinbo, Sui Yi, Zheng Liangtao, Zhang Shan-shan, Zuo Qiyang, Shi Xue-hui, Li Yan-fei, Zhang Wan-ke, Hu Yiyao, Kong Guanyi, Hong Hui-long, Tan Bing, Song Jian, Liu Zhang-xiong, Wang Yaoshen, Ruan Hang, Yeung Carol K L, Liu Jian, Wang Hailong, Zhang Li-juan, Guan Rong-xia, Wang Ke-jing, Li Wen-bin, Chen Shou-yi, Chang Ru-zhen, Jiang Zhi, Jackson Scott A, Li Ruiqiang, Qiu Li-juan

Abstract excerpt

Wild relatives of crops are an important source of genetic diversity for agriculture, but their gene repertoire remains largely unexplored. We report the establishment and analysis of a pan-genome of Glycine soja, the wild relative of cultivated soybean Glycine max, by sequencing and de novo assembly of seven phylogenetically and geographically representative accessions. Intergenomic comparisons identified...

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PMID: 25218520
DOI: 10.1038/nbt.2979

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