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ONCOLINER: A new solution for monitoring, improving, and harmonizing somatic variant calling across genomic oncology centers.

Cell genomics - 11 Sept 2024

Martín Rodrigo, Gaitán Nicolás, Jarlier Frédéric, Feuerbach Lars, de Soyres Henri, Arbonés Marc, Gutman Tom, Puiggròs Montserrat, Ferriz Alvaro, Gonzalez Asier, Estelles Lucía, Gut Ivo, Capella-Gutierrez Salvador, Stein Lincoln D, Brors Benedikt, Royo Romina, Hupé Philippe, Torrents David

Abstract excerpt

The characterization of somatic genomic variation associated with the biology of tumors is fundamental for cancer research and personalized medicine, as it guides the reliability and impact of cancer studies and genomic-based decisions in clinical oncology. However, the quality and scope of tumor genome analysis across cancer research centers and hospitals are currently highly heterogeneous, limiting the...

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PMID: 39216474
DOI: 10.1016/j.xgen.2024.100639
PMCID: PMC11480849

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