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Article

Crykey: Rapid identification of SARS-CoV-2 cryptic mutations in wastewater.

Nature communications - 28 May 2024

Liu Yunxi, Sapoval Nicolae, Gallego-García Pilar, Tomás Laura, Posada David, Treangen Todd J, Stadler Lauren B

Abstract excerpt

Wastewater surveillance for SARS-CoV-2 provides early warnings of emerging variants of concerns and can be used to screen for novel cryptic linked-read mutations, which are co-occurring single nucleotide mutations that are rare, or entirely missing, in existing SARS-CoV-2 databases. While previous approaches have focused on specific regions of the SARS-CoV-2 genome, there is a need for computational tools capable...

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Identifiers

PMID: 38806450
DOI: 10.1038/s41467-024-48334-w
PMCID: PMC11133379

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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