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Article

ColiSeq: a multiplex amplicon assay that provides strain level resolution of Escherichia coli directly from clinical specimens.

Microbiology spectrum - 4 Jun 2024

Williamson Charles H D, Vazquez Adam J, Nunnally Amalee E, Kyger Kristen, Fofanov Viacheslav Y, Furstenau Tara N, Hornstra Heidie M, Terriquez Joel, Keim Paul, Sahl Jason W

Abstract excerpt

Escherichia coli is a diverse pathogen, causing a range of disease in humans, from self-limiting diarrhea to urinary tract infections (UTIs). Uropathogenic E. coli (UPEC) is the most frequently observed uropathogen in UTIs, a common disease in high-income countries, incurring billions of dollars yearly in treatment costs. Although E. coli is easily grown and identified in the clinical laboratory, genotyping the...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Source

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Identifiers

PMID: 38651881
DOI: 10.1128/spectrum.04139-23
PMCID: PMC11237721

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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