Article
A conserved SNP variation in the pre-miR396c flanking region in Oryza sativa indica landraces correlates with mature miRNA abundance.
Scientific reports - 7 Feb 2023
Jaganathan Deepa, Rajakani Raja, Doddamani Dadakhalandar, Saravanan Divya, Pulipati Shalini, Hari Sundar G Vivek, Sellamuthu Gothandapani, Jayabalan Shilpha, Kumari Kumkum, Parthasarathy Pavithra, S Punitha, Ramalingam Sivaprakash, Shivaprasad Padubidri V, Venkataraman Gayatri
Abstract excerpt
Plant precursor miRNAs (pre-miRNA) have conserved evolutionary footprints that correlate with mode of miRNA biogenesis. In plants, base to loop and loop to base modes of biogenesis have been reported. Conserved structural element(s) in pre-miRNA play a major role in turn over and abundance of mature miRNA. Pre-miR396c sequences and secondary structural characteristics across Oryza species are presented. Based on...
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