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Article

Integrating neuroimaging and gene expression data using the imaging transcriptomics toolbox.

STAR protocols - 17 Jun 2022

Giacomel Alessio, Martins Daniel, Frigo Matteo, Turkheimer Federico, Williams Steven C R, Dipasquale Ottavia, Veronese Mattia

Abstract excerpt

The integration of neuroimaging and transcriptomics data, Imaging Transcriptomics, is becoming increasingly popular but standardized workflows for its implementation are still lacking. We describe the Imaging Transcriptomics toolbox, a new package that implements a full imaging transcriptomics pipeline using a user-friendly, command line interface. This toolbox allows the user to identify patterns of gene...

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Identifiers

PMID: 35479111
DOI: 10.1016/j.xpro.2022.101315
PMCID: PMC9036395

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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