Article
DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2.
BMC genomics - 11 Apr 2022
Yermanos Alexander, Hong Kai-Lin, Agrafiotis Andreas, Han Jiami, Nadeau Sarah, Valenzuela Cecilia, Azizoglu Asli, Ehling Roy, Gao Beichen, Spahr Michael, Neumeier Daniel, Chang Ching-Hsiang, Dounas Andreas, Petrillo Ezequiel, Nissen Ina, Burcklen Elodie, Feldkamp Mirjam, Beisel Christian, Oxenius Annette, Savic Miodrag, Stadler Tanja, Rudolf Fabian, Reddy Sai T
Abstract excerpt
BACKGROUND: The continued spread of SARS-CoV-2 and emergence of new variants with higher transmission rates and/or partial resistance to vaccines has further highlighted the need for large-scale testing and genomic surveillance. However, current diagnostic testing (e.g., PCR) and genomic surveillance methods (e.g., whole genome sequencing) are performed separately, thus limiting the detection and tracing of...
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