Article
Semi-Supervised Pipeline for Autonomous Annotation of SARS-CoV-2 Genomes.
Viruses - 3 Dec 2021
Beck Kristen L, Seabolt Edward, Agarwal Akshay, Nayar Gowri, Bianco Simone, Krishnareddy Harsha, Ngo Timothy A, Kunitomi Mark, Mukherjee Vandana, Kaufman James H
Abstract excerpt
SARS-CoV-2 genomic sequencing efforts have scaled dramatically to address the current global pandemic and aid public health. However, autonomous genome annotation of SARS-CoV-2 genes, proteins, and domains is not readily accomplished by existing methods and results in missing or incorrect sequences. To overcome this limitation, we developed a novel semi-supervised pipeline for automated gene, protein, and...
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