Article
Quinoa genome assembly employing genomic variation for guided scaffolding.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 1 Nov 2021
Bodrug-Schepers Alexandrina, Stralis-Pavese Nancy, Buerstmayr Hermann, Dohm Juliane C, Himmelbauer Heinz
Abstract excerpt
KEY MESSAGE: We propose to use the natural variation between individuals of a population for genome assembly scaffolding. In today's genome projects, multiple accessions get sequenced, leading to variant catalogs. Using such information to improve genome assemblies is attractive both cost-wise as well as scientifically, because the value of an assembly increases with its contiguity. We conclude that haplotype...
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