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Article

CoVrimer: A tool for aligning SARS-CoV-2 primer sequences and selection of conserved/degenerate primers.

Genomics - 1 Sept 2021

Vural-Ozdeniz Merve, Akturk Aslinur, Demirdizen Mert, Leka Ronaldo, Acar Rana, Konu Ozlen

Abstract excerpt

As mutations in SARS-CoV-2 virus accumulate rapidly, novel primers that amplify this virus sensitively and specifically are in demand. We have developed a webserver named CoVrimer by which users can search for and align existing or newly designed conserved/degenerate primer pair sequences against the viral genome and assess the mutation load of both primers and amplicons. CoVrimer uses mutation data obtained from...

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Identifiers

PMID: 34293476
DOI: 10.1016/j.ygeno.2021.07.020
PMCID: PMC8289724

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