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Integration of Infinium and Axiom SNP array data in the outcrossing species Malus × domestica and causes for seemingly incompatible calls.

BMC genomics - 7 Apr 2021

Howard Nicholas P, Troggio Michela, Durel Charles-Eric, Muranty Hélène, Denancé Caroline, Bianco Luca, Tillman John, van de Weg Eric

Abstract excerpt

BACKGROUND: Single nucleotide polymorphism (SNP) array technology has been increasingly used to generate large quantities of SNP data for use in genetic studies. As new arrays are developed to take advantage of new technology and of improved probe design using new genome sequence and panel data, a need to integrate data from different arrays and array platforms has arisen. This study was undertaken in view of our...

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PMID: 33827434
DOI: 10.1186/s12864-021-07565-7
PMCID: PMC8028180

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