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Integrative Analysis of Whole Genome Sequencing and Phenotypic Resistance Toward Prediction of Trimethoprim-Sulfamethoxazole Resistance in Staphylococcus aureus

14 Jan 2021

Abstract excerpt

As whole genome sequencing is becoming more accessible and affordable for clinical microbiological diagnostics, the reliability of genotypic antimicrobial resistance (AMR) prediction from sequencing data is an important issue to address. Computational AMR prediction can be performed at multiple levels. The first-level approach, such as simple AMR search relies heavily on the quality of the information fed into...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 33519755
DOI: 10.3389/fmicb.2020.607842

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