Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genomic diversity revealed by whole-genome sequencing in three Danish commercial pig breeds.

Journal of animal science - 1 Jul 2020

Cai Zexi, Sarup Pernille, Ostersen Tage, Nielsen Bjarne, Fredholm Merete, Karlskov-Mortensen Peter, Sørensen Peter, Jensen Just, Guldbrandtsen Bernt, Lund Mogens Sandø, Christensen Ole Fredslund, Sahana Goutam

Abstract excerpt

Whole-genome sequencing of 217 animals from three Danish commercial pig breeds (Duroc, Landrace [LL], and Yorkshire [YY]) was performed. Twenty-six million single-nucleotide polymorphisms (SNPs) and 8 million insertions or deletions (indels) were uncovered. Among the SNPs, 493,099 variants were located in coding sequences, and 29,430 were predicted to have a high functional impact such as gain or loss of stop...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Breeding
Share to Denmark

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Gene Frequency

Share to Genetic Variation

Share to Genome-Wide Association Study

Share to Genomics

Share to Quantitative Trait Loci

Source

Open in PubMed Open full text

Identifiers

PMID: 32687196
DOI: 10.1093/jas/skaa229
PMCID: PMC7394143

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genomic diversity revealed by whole-genome sequencing in three Danish commercial pig breeds.PMID 32687196Read ↗

Whole-genome resequencing analyses of five pig breeds, including Korean wild and native, and three European origin breeds.Semantic proximity Read ↗

Genomic diversity, inbreeding, and selection signatures in duroc, landrace, and yorkshire pigs from a long-term closed breeding system.Semantic proximity Read ↗

A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome.Semantic proximity Read ↗

Structural Variant Detection by Large-scale Sequencing Reveals New Evolutionary Evidence on Breed Divergence between Chinese and European Pigs.Semantic proximity Read ↗

Accelerated deciphering of the genetic architecture of agricultural economic traits in pigs using a low-coverage whole-genome sequencing strategy.Semantic proximity Read ↗

A deep catalog of autosomal single nucleotide variation in the pig.Semantic proximity Read ↗

Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources to different breeding and production systems.Semantic proximity Read ↗

Resequencing diverse Chinese indigenous breeds to enrich the map of genomic variations in swine.Semantic proximity Read ↗

Genome-wide genetic variation discovery in Chinese Taihu pig breeds using next generation sequencing.Semantic proximity Read ↗

Characterizing structural variants based on graph-genotyping provides insights into pig domestication and local adaption.Semantic proximity Read ↗

De Novo Assembly of Eight Commercial Crossbred Pig Genomes Provides Insights into the Potential Functional Impact of Structural Variation Hotspots.Semantic proximity Read ↗

Discovery of selection-driven genetic differences of Duroc, Landrace, and Yorkshire pig breeds by EigenGWAS and Fst analyses.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.