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Article

3D genome architecture coordinates trans and cis regulation of differentially expressed ear and tassel genes in maize.

Genome biology - 16 Jun 2020

Sun Yonghao, Dong Liang, Zhang Ying, Lin Da, Xu Weize, Ke Changxiong, Han Linqian, Deng Lulu, Li Guoliang, Jackson David, Li Xingwang, Yang Fang

Abstract excerpt

BACKGROUND: Maize ears and tassels are two separate types of inflorescence which are initiated by similar developmental processes but gradually develop distinct architectures. However, coordinated trans and cis regulation of differentially expressed genes determining ear and tassel architecture within the 3D genome context is largely unknown. RESULTS: We identify 56,055 and 52,633 open chromatin regions (OCRs) in...

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Share to Chromatin Assembly and Disassembly
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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Epistasis, Genetic

Share to Gene Expression Regulation, Plant

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Share to Polymorphism, Single Nucleotide

Share to Zea mays

Source

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Identifiers

PMID: 32546248
DOI: 10.1186/s13059-020-02063-7
PMCID: PMC7296987

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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