Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genetic effects on chromatin accessibility reveal the molecular mechanisms of complex traits in maize.

The Plant journal : for cell and molecular biology - 1 Aug 2025

Zhu Yongli, Ngan Heiyuen, Liu Weilun, Zhu Tao, Li Wenqiang, Xiao Yingjie, Zhuo Lin, Chen Dijun, Tu Xiaoyu, Gao Kang, Yan Jianbing, Zhong Silin, Yang Ning

Abstract excerpt

Cis-regulatory elements (CREs) are critical for modulating gene expression and phenotypic diversity in maize. While genome-wide association study (GWAS) hits and expression quantitative trait loci (eQTLs) are often enriched in CREs, their molecular mechanisms remain poorly understood. Characterizing CREs within accessible chromatin regions (ACRs) offers a powerful approach to link noncoding variants to chromatin...

Read the complete abstract on PubMed

Topics

Zea mays
Chromatin
Quantitative Trait Loci
Genome-Wide Association Study
Gene Expression Regulation, Plant

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Transcription Factors

Phenotype

Plant Proteins

Plant Leaves

Source

Identifiers

PMID: 40827700
DOI: 10.1111/tpj.70437

Genes

TF

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 23 Oct 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genetic effects on chromatin accessibility reveal the molecular mechanisms of complex traits in maize.PMID 40827700Read ↗

The genetic architecture of cell type-specific cis regulation in maize.Semantic proximity Read ↗

3D genome architecture coordinates trans and cis regulation of differentially expressed ear and tassel genes in maize.Semantic proximity Read ↗

MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication.Semantic proximity Read ↗

Association mapping across numerous traits reveals patterns of functional variation in maize.Semantic proximity Read ↗

Stepwise cis-Regulatory Changes in ZCN8 Contribute to Maize Flowering-Time Adaptation.Semantic proximity Read ↗

Hybrid allele-specific ChIP-Seq analysis links variation in transcription factor binding to traits in maizeSemantic proximity Read ↗

Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize.Semantic proximity Read ↗

Maize pan-transcriptome provides novel insights into genome complexity and quantitative trait variationSemantic proximity Read ↗

De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes.Semantic proximity Read ↗

Population-level gene expression can repeatedly link genes to functions in maize.Semantic proximity Read ↗

Population-level analysis reveals the widespread occurrence and phenotypic consequence of DNA methylation variation not tagged by genetic variation in maize.Semantic proximity Read ↗

PlantCADB: A comprehensive plant chromatin accessibility databaseSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.