Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Phylogenetic background and habitat drive the genetic diversification of Escherichia coli.

PLoS genetics - 1 Jun 2020

Touchon Marie, Perrin Amandine, de Sousa Jorge André Moura, Vangchhia Belinda, Burn Samantha, O'Brien Claire L, Denamur Erick, Gordon David, Rocha Eduardo Pc

Abstract excerpt

Escherichia coli is mostly a commensal of birds and mammals, including humans, where it can act as an opportunistic pathogen. It is also found in water and sediments. We investigated the phylogeny, genetic diversification, and habitat-association of 1,294 isolates representative of the phylogenetic diversity of more than 5,000 isolates from the Australian continent. Since many previous studies focused on clinical...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Animals, Wild
Share to Fresh Water

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Gene Transfer, Horizontal

Share to Genome Size

Share to Inflammatory Bowel Diseases

Share to Interspersed Repetitive Sequences

Share to Soil Microbiology

Source

Open in PubMed Open full text

Identifiers

PMID: 32530914
DOI: 10.1371/journal.pgen.1008866
PMCID: PMC7314097

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Phylogenetic background and habitat drive the genetic diversification of Escherichia coli.PMID 32530914Read ↗

Phylogenetic background and habitat drive the genetic diversification of <i>Escherichia coli</i>Semantic proximity Read ↗

Population Phylogenomics of Extraintestinal Pathogenic Escherichia coli.Semantic proximity Read ↗

Genetic structure of natural populations of Escherichia coli in wild hosts on different continents.Semantic proximity Read ↗

Comparisons of infant Escherichia coli isolates link genomic profiles with adaptation to the ecological niche.Semantic proximity Read ↗

Everything is everywhere but Escherichia coli adapts to different nichesSemantic proximity Read ↗

Aspects of genome plasticity in pathogenic Escherichia coli.Semantic proximity Read ↗

Genome Plasticity in Clinical Escherichia coli: Comparative Insights into Pathogenicity Islands, Prophages, and CRISPR–Cas SystemsSemantic proximity Read ↗

The population genetics of pathogenic Escherichia coli.Semantic proximity Read ↗

Genomes of a major nosocomial pathogen <i>Enterococcus faecium</i> are shaped by adaptive evolution of the chromosome and plasmidomeSemantic proximity Read ↗

Virulence and Invasion Profiles of Escherichia coli Across One Health Reservoirs: Genomic Insights into High-Risk Clones and Their Defense Systems.Semantic proximity Read ↗

Shifting genomes, rising threats: Adaptive evolution and antimicrobial resistance of E. coli ST10 across African ecologies.Semantic proximity Read ↗

Emergence of Epidemic Multidrug-Resistant Enterococcus faecium from Animal and Commensal StrainsSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.