Article
A synthesis of bacterial and archaeal phenotypic trait data.
Scientific data - 5 Jun 2020
Madin Joshua S, Nielsen Daniel A, Brbic Maria, Corkrey Ross, Danko David, Edwards Kyle, Engqvist Martin K M, Fierer Noah, Geoghegan Jemma L, Gillings Michael, Kyrpides Nikos C, Litchman Elena, Mason Christopher E, Moore Lisa, Nielsen Søren L, Paulsen Ian T, Price Nathan D, Reddy T B K, Richards Matthew A, Rocha Eduardo P C, Schmidt Thomas M, Shaaban Heba, Shukla Maulik, Supek Fran, Tetu Sasha G, Vieira-Silva Sara, Wattam Alice R, Westfall David A, Westoby Mark
Abstract excerpt
A synthesis of phenotypic and quantitative genomic traits is provided for bacteria and archaea, in the form of a scripted, reproducible workflow that standardizes and merges 26 sources. The resulting unified dataset covers 14 phenotypic traits, 5 quantitative genomic traits, and 4 environmental characteristics for approximately 170,000 strain-level and 15,000 species-aggregated records. It spans all habitats...
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