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CIPR: a web-based R/shiny app and R package to annotate cell clusters in single cell RNA sequencing experiments

15 May 2020

Abstract excerpt

BACKGROUND: Single cell RNA sequencing (scRNAseq) has provided invaluable insights into cellular heterogeneity and functional states in health and disease. During the analysis of scRNAseq data, annotating the biological identity of cell clusters is an important step before downstream analyses and it remains technically challenging. The current solutions for annotating single cell clusters generally lack a...

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PMID: 32414321
DOI: 10.1186/s12859-020-3538-2

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