Article
Using Monte Carlo method to include polygenic effects in calculation of SNP-BLUP model reliability.
Journal of dairy science - 1 Jun 2020
Ben Zaabza H, Mäntysaari E A, Strandén I
Abstract excerpt
An SNP-BLUP model is computationally scalable even for large numbers of genotyped animals. When genetic variation cannot be completely captured by SNP markers, a more accurate model is obtained by fitting a residual polygenic effect (RPG) as well. However, inclusion of the RPG effect increases the size of the SNP-BLUP mixed model equations (MME) by the number of genotyped animals. Consequently, the calculation of...
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