Article
A computationally efficient method for approximating reliabilities in large-scale single-step genomic prediction.
Genetics, selection, evolution : GSE - 5 Jan 2023
Gao Hongding, Kudinov Andrei A, Taskinen Matti, Pitkänen Timo J, Lidauer Martin H, Mäntysaari Esa A, Strandén Ismo
Abstract excerpt
BACKGROUND: In this study, computationally efficient methods to approximate the reliabilities of genomic estimated breeding values (GEBV) in a single-step genomic prediction model including a residual polygenic (RPG) effect are described. In order to calculate the reliabilities of the genotyped animals, a single nucleotide polymorphism best linear unbiased prediction (SNPBLUP) or a genomic BLUP (GBLUP), was used,...
Topics
- Animals
- Female
- Reproducibility of Results
- Genome
- Genomics
- Genotype
- Multifactorial Inheritance
- Polymorphism, Single Nucleotide
- Pedigree
- Phenotype
- Models, Genetic