Article
PyBSASeq: a simple and effective algorithm for bulked segregant analysis with whole-genome sequencing data.
BMC bioinformatics - 6 Mar 2020
Zhang Jianbo, Panthee Dilip R
Abstract excerpt
BACKGROUND: Bulked segregant analysis (BSA), coupled with next-generation sequencing, allows the rapid identification of both qualitative and quantitative trait loci (QTL), and this technique is referred to as BSA-Seq here. The current SNP index method and G-statistic method for BSA-Seq data analysis require relatively high sequencing coverage to detect significant single nucleotide polymorphism (SNP)-trait...
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